Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC140878.1-201ENST00000565277 250 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AL138725.1-201ENST00000407347 1314 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC064801.2-201ENST00000625052 1303 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 MKRN5P-201ENST00000445263 1467 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC024075.2-201ENST00000598112 1473 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 USP17L6P-201ENST00000382470 1197 ntBASIC11.81□□□□□ -0.52
RAB40CQ96S21 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.81□□□□□ -0.52
RAB40CQ96S21 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 AC027369.6-201ENST00000525520 931 ntBASIC11.81□□□□□ -0.52
RAB40CQ96S21 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB40CQ96S21 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB40CQ96S21 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MARK2P9-201ENST00000430958 1727 ntBASIC11.8□□□□□ -0.52
RAB40CQ96S21 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
RAB40CQ96S21 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAB40CQ96S21 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms