Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC11.05□□□□□ -0.64
AP1S3Q96PC3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC018665.1-201ENST00000622927 1362 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC074338.1-201ENST00000416825 156 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AL133215.2-201ENST00000609242 977 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC120114.3-201ENST00000611923 658 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CETN4P-206ENST00000642099 2168 ntBASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AP1S3Q96PC3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
AP1S3Q96PC3 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.03□□□□□ -0.64
AP1S3Q96PC3 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms