Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RN7SL774P-201ENST00000577467 290 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC008825.2-201ENST00000603374 718 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 AL645939.5-201ENST00000606834 243 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC022748.3-201ENST00000621828 275 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 PTENP1-202ENST00000532280 3996 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC004899.1-201ENST00000424687 1714 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 SHC1P1-201ENST00000425230 1745 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AC092053.3-201ENST00000641308 4975 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AL353637.1-201ENST00000451571 732 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 IMP3P2-201ENST00000489760 475 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 MARK2P5-201ENST00000507649 634 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 AC024681.1-201ENST00000521917 487 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 AC090857.1-201ENST00000527400 390 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AL162426.1-201ENST00000624141 743 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 NAP1L6-202ENST00000641404 1222 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 AC138969.2-201ENST00000532739 9932 ntBASIC13.75□□□□□ -0.21
TM9SF4Q92544 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF4Q92544 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF4Q92544 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC015802.1-201ENST00000588104 1449 ntBASIC13.74□□□□□ -0.21
TM9SF4Q92544 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.74□□□□□ -0.21
TM9SF4Q92544 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TM9SF4Q92544 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms