Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
DDX1Q92499 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
DDX1Q92499 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.38■□□□□ 0.05
DDX1Q92499 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
DDX1Q92499 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 USP17L6P-201ENST00000382470 1197 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.38■□□□□ 0.05
DDX1Q92499 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC008267.1-201ENST00000474858 1069 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC005730.2-201ENST00000564549 1184 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.38■□□□□ 0.05
DDX1Q92499 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC005324.6-201ENST00000587972 613 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC009884.2-201ENST00000603110 324 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
DDX1Q92499 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 LAP3P2-201ENST00000454686 1454 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
DDX1Q92499 AC111170.3-201ENST00000624282 2464 ntBASIC15.38■□□□□ 0.05
DDX1Q92499 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DDX1Q92499 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.38■□□□□ 0.05
DDX1Q92499 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 AC130686.1-201ENST00000622936 2466 ntBASIC15.37■□□□□ 0.05
DDX1Q92499 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 KRT18P36-201ENST00000411618 1276 ntBASIC15.37■□□□□ 0.05
DDX1Q92499 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.37■□□□□ 0.05
DDX1Q92499 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.37■□□□□ 0.05
DDX1Q92499 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 CHMP4BP1-201ENST00000556017 588 ntBASIC15.37■□□□□ 0.05
DDX1Q92499 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
DDX1Q92499 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.37■□□□□ 0.05
DDX1Q92499 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.37■□□□□ 0.05
DDX1Q92499 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.37■□□□□ 0.05
DDX1Q92499 AC124068.2-201ENST00000569473 1109 ntBASIC15.37■□□□□ 0.05
DDX1Q92499 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.37■□□□□ 0.05
DDX1Q92499 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
DDX1Q92499 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.37■□□□□ 0.05
DDX1Q92499 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DDX1Q92499 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DDX1Q92499 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms