Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 RN7SL564P-201ENST00000496309 250 ntBASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 AC120498.7-201ENST00000562876 330 ntBASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 RN7SL300P-201ENST00000582522 318 ntBASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 Z82244.2-201ENST00000632196 448 ntBASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCDC168Q8NDH2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 ASS1P2-201ENST00000439895 1223 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC092910.2-201ENST00000491262 348 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC106782.5-201ENST00000616011 337 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SIGLEC20P-201ENST00000595243 1311 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 KHSRPP1-201ENST00000427983 1768 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC009093.10-201ENST00000641956 1442 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC092573.1-201ENST00000433054 884 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 NAT9-219ENST00000582524 573 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AP001462.1-201ENST00000594089 452 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC005746.3-201ENST00000614751 393 ntBASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCDC168Q8NDH2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 ODCP-201ENST00000459650 1639 ntBASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCDC168Q8NDH2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms