Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 MIR326-201ENST00000362220 95 ntBASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 U91328.1-201ENST00000437528 223 ntBASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 HIST2H2BB-201ENST00000449108 381 ntBASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 AP006547.1-201ENST00000563435 692 ntBASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TTC9CQ8N5M4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AC079776.1-201ENST00000401540 1152 ntBASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AL161932.2-201ENST00000435436 679 ntBASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 AL035252.4-201ENST00000624174 288 ntBASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TTC9CQ8N5M4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms