Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLX4Q8IY92 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLX4Q8IY92 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 PHBP10-201ENST00000416467 784 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 AC005722.1-201ENST00000431878 964 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLX4Q8IY92 PSME2P2-201ENST00000453033 700 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 KRT18P15-201ENST00000458108 1291 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 AC147876.1-201ENST00000504408 322 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 RNA5SP420-201ENST00000516997 137 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 RN7SL605P-201ENST00000577229 281 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC17.08■□□□□ 0.33
SLX4Q8IY92 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SLX4Q8IY92 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLX4Q8IY92 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLX4Q8IY92 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 U73169.1-201ENST00000395152 367 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 GGTLC4P-201ENST00000402176 664 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 RPSAP6-201ENST00000417882 882 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC004923.3-201ENST00000527532 355 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC064850.1-201ENST00000413279 1398 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC103702.1-201ENST00000548801 2630 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC090505.1-201ENST00000430515 1834 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 USP17L6P-201ENST00000382470 1197 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 CSTP2-201ENST00000610599 398 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 TCAF2P1-201ENST00000291129 2421 ntBASIC17.07■□□□□ 0.32
SLX4Q8IY92 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLX4Q8IY92 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SLX4Q8IY92 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.06■□□□□ 0.32
SLX4Q8IY92 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms