Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AC026316.1-201ENST00000398900 414 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AL807761.2-201ENST00000422849 729 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 MIR4706-201ENST00000582134 82 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AC138894.2-201ENST00000602838 371 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AL022313.4-201ENST00000562756 2046 ntBASIC16.01■□□□□ 0.15
CCDC60Q8IWA6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 AC069218.1-201ENST00000435269 762 ntBASIC16■□□□□ 0.15
CCDC60Q8IWA6 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 ALG1L13P-202ENST00000519320 584 ntBASIC16■□□□□ 0.15
CCDC60Q8IWA6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 RN7SL190P-201ENST00000582519 257 ntBASIC16■□□□□ 0.15
CCDC60Q8IWA6 MIR4522-201ENST00000584932 87 ntBASIC16■□□□□ 0.15
CCDC60Q8IWA6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 LINC01815-202ENST00000641468 1409 ntBASIC16■□□□□ 0.15
CCDC60Q8IWA6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC60Q8IWA6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC60Q8IWA6 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 MARK2P16-201ENST00000605714 1723 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 HSPA8P5-201ENST00000456928 2069 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 FTH1P22-201ENST00000456305 520 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 AC009560.1-201ENST00000620208 434 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms