Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 API5-211ENST00000534695 560 ntTSL 5 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 AC138696.2-201ENST00000607376 223 ntBASIC14.66□□□□□ -0.06
RAPH1Q70E73 AL033527.5-201ENST00000641382 801 ntBASIC14.66□□□□□ -0.06
RAPH1Q70E73 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAPH1Q70E73 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.66□□□□□ -0.06
RAPH1Q70E73 FKBP4P6-201ENST00000457486 1332 ntBASIC14.66□□□□□ -0.06
RAPH1Q70E73 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC139712.1-201ENST00000378256 1875 ntBASIC14.65□□□□□ -0.06
RAPH1Q70E73 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 FAM207CP-201ENST00000443486 507 ntBASIC14.65□□□□□ -0.06
RAPH1Q70E73 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 LINC02560-201ENST00000596379 459 ntBASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC145423.3-201ENST00000615987 467 ntBASIC14.65□□□□□ -0.06
RAPH1Q70E73 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.65□□□□□ -0.06
RAPH1Q70E73 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAPH1Q70E73 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAPH1Q70E73 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.64□□□□□ -0.07
RAPH1Q70E73 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms