Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC092612.1-201ENST00000514501 998 ntBASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 U73169.1-201ENST00000395152 367 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 HNRNPA1P56-201ENST00000505767 954 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 SRPK2P-201ENST00000523408 1100 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MIR6816-201ENST00000620368 66 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 AC097359.2-201ENST00000604992 2389 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 RPL29P2-202ENST00000498671 657 ntBASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPAQ5VT25 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 AL390755.1-201ENST00000623716 2027 ntBASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 HSPA7-201ENST00000445535 1927 ntBASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 AC041040.1-201ENST00000425197 460 ntBASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 BMF-206ENST00000558774 671 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 RN7SL134P-201ENST00000579756 303 ntBASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPAQ5VT25 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
CDC42BPAQ5VT25 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC008620.2-201ENST00000510294 1569 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 CICP16-201ENST00000502609 2813 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 HIST1H2APS2-201ENST00000454426 370 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC093700.1-201ENST00000503348 717 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 AC004686.1-201ENST00000605113 538 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 KRT8P42-201ENST00000405771 1399 ntBASIC21.07■□□□□ 0.96
CDC42BPAQ5VT25 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms