Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.33□□□□□ -0.28
PUDPQ08623 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PUDPQ08623 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
PUDPQ08623 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
PUDPQ08623 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PUDPQ08623 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.33□□□□□ -0.28
PUDPQ08623 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 AP000593.2-201ENST00000542775 1433 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 COX5BP8-201ENST00000416911 349 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 KRT17P7-201ENST00000451704 1104 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 RNA5SP486-201ENST00000515961 83 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.32□□□□□ -0.28
PUDPQ08623 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.32□□□□□ -0.28
PUDPQ08623 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PUDPQ08623 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 IGHV3-72-202ENST00000621503 303 ntBASIC13.32□□□□□ -0.28
PUDPQ08623 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PUDPQ08623 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.32□□□□□ -0.28
PUDPQ08623 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PUDPQ08623 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 INE2-201ENST00000630399 1874 ntBASIC13.31□□□□□ -0.28
PUDPQ08623 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.31□□□□□ -0.28
PUDPQ08623 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PUDPQ08623 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PUDPQ08623 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PUDPQ08623 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PUDPQ08623 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.31□□□□□ -0.28
PUDPQ08623 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
PUDPQ08623 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.31□□□□□ -0.28
PUDPQ08623 NME2P1-201ENST00000426182 414 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms