Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 OR4A49P-201ENST00000527050 632 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
PRKDCP78527 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 AC136621.1-201ENST00000624017 2304 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 SSR4P1-201ENST00000415143 412 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 AC010442.2-201ENST00000509301 407 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 AC090825.2-201ENST00000557959 739 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC9.97□□□□□ -0.81
PRKDCP78527 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
PRKDCP78527 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 KLK8-203ENST00000347619 555 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC9.97□□□□□ -0.81
PRKDCP78527 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
PRKDCP78527 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC9.97□□□□□ -0.81
PRKDCP78527 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC9.97□□□□□ -0.81
PRKDCP78527 MIR7848-201ENST00000617402 101 ntBASIC9.97□□□□□ -0.81
PRKDCP78527 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
PRKDCP78527 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
PRKDCP78527 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 AL513477.1-201ENST00000602865 2407 ntBASIC9.96□□□□□ -0.81
PRKDCP78527 AL391005.1-201ENST00000623953 2435 ntBASIC9.96□□□□□ -0.81
PRKDCP78527 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC9.96□□□□□ -0.81
PRKDCP78527 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.96□□□□□ -0.81
PRKDCP78527 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.96□□□□□ -0.81
PRKDCP78527 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC9.96□□□□□ -0.81
PRKDCP78527 AC105443.1-201ENST00000433754 712 ntBASIC9.96□□□□□ -0.81
PRKDCP78527 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.96□□□□□ -0.81
PRKDCP78527 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC9.96□□□□□ -0.81
PRKDCP78527 CARS-216ENST00000639317 135 ntTSL 5 BASIC9.96□□□□□ -0.81
PRKDCP78527 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC9.96□□□□□ -0.81
PRKDCP78527 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.96□□□□□ -0.81
PRKDCP78527 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
PRKDCP78527 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 PGAM1P10-201ENST00000402426 761 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC9.96□□□□□ -0.82
PRKDCP78527 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 ACE3P-201ENST00000423435 1973 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 AC068760.1-201ENST00000493579 1953 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 RBMXP1-201ENST00000408004 1191 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 HMGN1P4-201ENST00000419500 290 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC9.96□□□□□ -0.82
PRKDCP78527 RN7SL646P-201ENST00000492969 297 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC9.96□□□□□ -0.82
PRKDCP78527 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC9.96□□□□□ -0.82
PRKDCP78527 AC136475.9-201ENST00000605240 497 ntBASIC9.96□□□□□ -0.82
PRKDCP78527 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.96□□□□□ -0.82
PRKDCP78527 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.96□□□□□ -0.82
PRKDCP78527 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.96□□□□□ -0.82
PRKDCP78527 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
PRKDCP78527 CD9-212ENST00000610354 1315 ntTSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 AC124319.4-201ENST00000622931 2161 ntBASIC9.95□□□□□ -0.82
PRKDCP78527 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC9.95□□□□□ -0.82
PRKDCP78527 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
PRKDCP78527 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
PRKDCP78527 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC9.95□□□□□ -0.82
PRKDCP78527 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms