Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.64□□□□□ -0.39
UBA52P62987 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBA52P62987 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
UBA52P62987 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 AC074338.1-201ENST00000416825 156 ntBASIC12.63□□□□□ -0.39
UBA52P62987 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 AP001889.1-201ENST00000525414 633 ntBASIC12.63□□□□□ -0.39
UBA52P62987 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 AC009486.1-201ENST00000569860 813 ntBASIC12.63□□□□□ -0.39
UBA52P62987 AC124283.3-201ENST00000570869 594 ntBASIC12.63□□□□□ -0.39
UBA52P62987 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
UBA52P62987 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.63□□□□□ -0.39
UBA52P62987 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 AC020907.1-201ENST00000616460 1350 ntBASIC12.63□□□□□ -0.39
UBA52P62987 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.63□□□□□ -0.39
UBA52P62987 AC068760.1-201ENST00000493579 1953 ntBASIC12.63□□□□□ -0.39
UBA52P62987 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UBA52P62987 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
UBA52P62987 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms