Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.29■□□□□ 0.04
USP46P62068 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.29■□□□□ 0.04
USP46P62068 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 AL355994.1-201ENST00000424379 260 ntBASIC15.29■□□□□ 0.04
USP46P62068 PDIA3P2-201ENST00000428073 158 ntBASIC15.29■□□□□ 0.04
USP46P62068 OR2R1P-201ENST00000441404 914 ntBASIC15.29■□□□□ 0.04
USP46P62068 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 AC073150.1-201ENST00000450406 1084 ntBASIC15.29■□□□□ 0.04
USP46P62068 RN7SL720P-201ENST00000488178 304 ntBASIC15.29■□□□□ 0.04
USP46P62068 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 AC090857.1-201ENST00000527400 390 ntBASIC15.29■□□□□ 0.04
USP46P62068 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.29■□□□□ 0.04
USP46P62068 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.29■□□□□ 0.04
USP46P62068 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
USP46P62068 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.29■□□□□ 0.04
USP46P62068 AC106872.11-201ENST00000605838 421 ntBASIC15.29■□□□□ 0.04
USP46P62068 AC084346.2-201ENST00000607097 949 ntBASIC15.29■□□□□ 0.04
USP46P62068 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 AL390755.1-201ENST00000623716 2027 ntBASIC15.29■□□□□ 0.04
USP46P62068 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.29■□□□□ 0.04
USP46P62068 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.29■□□□□ 0.04
USP46P62068 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP46P62068 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 RN7SL769P-201ENST00000469386 295 ntBASIC15.28■□□□□ 0.04
USP46P62068 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.28■□□□□ 0.04
USP46P62068 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 AC020922.3-201ENST00000595064 547 ntBASIC15.28■□□□□ 0.04
USP46P62068 MEG3_2.1-201ENST00000611456 105 ntBASIC15.28■□□□□ 0.04
USP46P62068 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP46P62068 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 MYADML-201ENST00000474610 2147 ntBASIC15.28■□□□□ 0.04
USP46P62068 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.28■□□□□ 0.04
USP46P62068 AGGF1P1-201ENST00000509500 2073 ntBASIC15.28■□□□□ 0.04
USP46P62068 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP46P62068 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
USP46P62068 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.27■□□□□ 0.04
USP46P62068 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.27■□□□□ 0.04
USP46P62068 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP46P62068 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms