Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.32□□□□□ -0.28
CDC42P60953 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.32□□□□□ -0.28
CDC42P60953 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.32□□□□□ -0.28
CDC42P60953 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.32□□□□□ -0.28
CDC42P60953 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.32□□□□□ -0.28
CDC42P60953 AC135782.3-201ENST00000562782 2105 ntBASIC13.32□□□□□ -0.28
CDC42P60953 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.32□□□□□ -0.28
CDC42P60953 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 AC079781.4-201ENST00000641908 219 ntBASIC13.32□□□□□ -0.28
CDC42P60953 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CDC42P60953 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC42P60953 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC42P60953 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42P60953 KLF2P2-201ENST00000416807 1039 ntBASIC13.31□□□□□ -0.28
CDC42P60953 CNN2P11-201ENST00000429351 262 ntBASIC13.31□□□□□ -0.28
CDC42P60953 EIF3FP3-201ENST00000434851 1086 ntBASIC13.31□□□□□ -0.28
CDC42P60953 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 KLF2P3-201ENST00000451977 1087 ntBASIC13.31□□□□□ -0.28
CDC42P60953 RN7SL399P-201ENST00000471648 279 ntBASIC13.31□□□□□ -0.28
CDC42P60953 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 AP001582.1-201ENST00000525856 295 ntBASIC13.31□□□□□ -0.28
CDC42P60953 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.31□□□□□ -0.28
CDC42P60953 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 SNHG9-202ENST00000564014 471 ntBASIC13.31□□□□□ -0.28
CDC42P60953 AC140878.1-201ENST00000565277 250 ntBASIC13.31□□□□□ -0.28
CDC42P60953 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42P60953 SPDYE22P-201ENST00000582158 798 ntBASIC13.31□□□□□ -0.28
CDC42P60953 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC42P60953 SRD5A3P1-201ENST00000603021 949 ntBASIC13.31□□□□□ -0.28
CDC42P60953 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 AP001002.3-201ENST00000623482 206 ntBASIC13.31□□□□□ -0.28
CDC42P60953 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CDC42P60953 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 AC064801.2-201ENST00000625052 1303 ntBASIC13.31□□□□□ -0.28
CDC42P60953 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDC42P60953 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC42P60953 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC42P60953 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDC42P60953 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms