Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LAP3P2-201ENST00000454686 1454 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 AL022313.4-201ENST00000562756 2046 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.12□□□□□ -0.15
AP1S2P56377 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.12□□□□□ -0.15
AP1S2P56377 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.12□□□□□ -0.15
AP1S2P56377 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.12□□□□□ -0.15
AP1S2P56377 AP000346.4-201ENST00000614827 381 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 AL023803.2-201ENST00000620080 638 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 AC133540.1-201ENST00000620845 1019 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.12□□□□□ -0.15
AP1S2P56377 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.12□□□□□ -0.15
AP1S2P56377 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP1S2P56377 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP1S2P56377 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP1S2P56377 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AP1S2P56377 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 AC144522.1-201ENST00000625111 1658 ntBASIC14.11□□□□□ -0.15
AP1S2P56377 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S2P56377 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
AP1S2P56377 ST20-AS1-201ENST00000560255 4223 ntBASIC14.11□□□□□ -0.15
AP1S2P56377 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S2P56377 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S2P56377 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S2P56377 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S2P56377 KLF2P1-201ENST00000447438 1042 ntBASIC14.11□□□□□ -0.15
AP1S2P56377 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.11□□□□□ -0.15
AP1S2P56377 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AP1S2P56377 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S2P56377 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.11□□□□□ -0.15
AP1S2P56377 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AP1S2P56377 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.11□□□□□ -0.15
AP1S2P56377 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S2P56377 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.11□□□□□ -0.15
AP1S2P56377 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms