Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
APOC4P55056 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 MYADML-201ENST00000474610 2147 ntBASIC10.63□□□□□ -0.71
APOC4P55056 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 AC006504.5-208ENST00000588784 2401 ntBASIC10.63□□□□□ -0.71
APOC4P55056 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.63□□□□□ -0.71
APOC4P55056 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
APOC4P55056 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOC4P55056 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
APOC4P55056 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.62□□□□□ -0.71
APOC4P55056 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
APOC4P55056 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
APOC4P55056 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 ELK2AP-201ENST00000392510 1007 ntBASIC10.62□□□□□ -0.71
APOC4P55056 KRT18P36-201ENST00000411618 1276 ntBASIC10.62□□□□□ -0.71
APOC4P55056 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 RN7SL530P-201ENST00000485097 298 ntBASIC10.62□□□□□ -0.71
APOC4P55056 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.62□□□□□ -0.71
APOC4P55056 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 AC020922.3-201ENST00000595064 547 ntBASIC10.62□□□□□ -0.71
APOC4P55056 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC10.62□□□□□ -0.71
APOC4P55056 AL606495.2-201ENST00000605867 535 ntBASIC10.62□□□□□ -0.71
APOC4P55056 LINC01783-202ENST00000614408 828 ntBASIC10.62□□□□□ -0.71
APOC4P55056 BX284668.2-205ENST00000619677 828 ntBASIC10.62□□□□□ -0.71
APOC4P55056 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 AGGF1P1-201ENST00000509500 2073 ntBASIC10.62□□□□□ -0.71
APOC4P55056 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
APOC4P55056 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.62□□□□□ -0.71
APOC4P55056 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 AC087386.2-201ENST00000623212 4637 ntBASIC10.62□□□□□ -0.71
APOC4P55056 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC10.62□□□□□ -0.71
APOC4P55056 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOC4P55056 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.62□□□□□ -0.71
APOC4P55056 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms