Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
CLCN4P51793 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLCN4P51793 PYY2-201ENST00000315776 282 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN4P51793 AC098934.1-203ENST00000442868 1262 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.12■□□□□ 0.01
CLCN4P51793 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLCN4P51793 RN7SL357P-201ENST00000581065 298 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 AL133467.4-201ENST00000602953 725 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN4P51793 FO393412.1-201ENST00000619841 382 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 AC138466.4-201ENST00000623965 852 ntBASIC15.12■□□□□ 0.01
CLCN4P51793 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN4P51793 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN4P51793 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN4P51793 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN4P51793 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN4P51793 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN4P51793 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 AL390755.1-201ENST00000623716 2027 ntBASIC15.11■□□□□ 0.01
CLCN4P51793 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCN4P51793 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.11■□□□□ 0.01
CLCN4P51793 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.11■□□□□ 0.01
CLCN4P51793 RPL35P9-201ENST00000446059 350 ntBASIC15.11■□□□□ 0.01
CLCN4P51793 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.11■□□□□ 0.01
CLCN4P51793 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.11■□□□□ 0.01
CLCN4P51793 AC006158.1-201ENST00000610661 249 ntBASIC15.11■□□□□ 0.01
CLCN4P51793 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN4P51793 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN4P51793 AL591122.2-201ENST00000624125 1853 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms