Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC064801.2-201ENST00000625052 1303 ntBASIC12.94□□□□□ -0.34
CSNK1A1P48729 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 Z93015.1-201ENST00000451718 390 ntBASIC12.94□□□□□ -0.34
CSNK1A1P48729 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 AC009955.4-201ENST00000597192 544 ntBASIC12.94□□□□□ -0.34
CSNK1A1P48729 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSNK1A1P48729 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.94□□□□□ -0.34
CSNK1A1P48729 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC015818.8-201ENST00000587907 1519 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 FAM58BP-201ENST00000439056 645 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 MTX1P1-201ENST00000440904 838 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 RNA5SP412-201ENST00000516234 123 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 RBM8B-201ENST00000555532 525 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 MIR4259-201ENST00000584466 101 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC009884.2-201ENST00000603110 324 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC009542.2-202ENST00000619004 1067 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC041040.2-201ENST00000622926 2899 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms