Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFC1P35251 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RFC1P35251 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFC1P35251 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 MIR658-201ENST00000385210 100 ntBASIC15.31■□□□□ 0.04
RFC1P35251 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 AL157407.1-201ENST00000435784 904 ntBASIC15.31■□□□□ 0.04
RFC1P35251 AL645933.1-201ENST00000440087 609 ntBASIC15.31■□□□□ 0.04
RFC1P35251 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.31■□□□□ 0.04
RFC1P35251 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 AC005586.2-201ENST00000563946 837 ntBASIC15.31■□□□□ 0.04
RFC1P35251 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.31■□□□□ 0.04
RFC1P35251 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 AC017083.2-201ENST00000608069 979 ntBASIC15.31■□□□□ 0.04
RFC1P35251 AC133552.6-201ENST00000613406 534 ntBASIC15.31■□□□□ 0.04
RFC1P35251 AC244157.2-201ENST00000616239 1006 ntBASIC15.31■□□□□ 0.04
RFC1P35251 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RFC1P35251 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RFC1P35251 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.31■□□□□ 0.04
RFC1P35251 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RFC1P35251 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFC1P35251 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.31■□□□□ 0.04
RFC1P35251 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RFC1P35251 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
RFC1P35251 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.3■□□□□ 0.04
RFC1P35251 YBX1P6-201ENST00000442962 1002 ntBASIC15.3■□□□□ 0.04
RFC1P35251 KLF2P1-201ENST00000447438 1042 ntBASIC15.3■□□□□ 0.04
RFC1P35251 KRT223P-202ENST00000449164 1292 ntBASIC15.3■□□□□ 0.04
RFC1P35251 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFC1P35251 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 MIR6720-201ENST00000611664 98 ntBASIC15.3■□□□□ 0.04
RFC1P35251 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.3■□□□□ 0.04
RFC1P35251 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFC1P35251 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFC1P35251 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.29■□□□□ 0.04
RFC1P35251 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.29■□□□□ 0.04
RFC1P35251 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms