Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.78□□□□□ -0.2
PTPN6P29350 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PTPN6P29350 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PTPN6P29350 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTPN6P29350 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PTPN6P29350 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PTPN6P29350 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
PTPN6P29350 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PTPN6P29350 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PTPN6P29350 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTPN6P29350 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 TPM3P8-201ENST00000330554 643 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PTPN6P29350 CD8B2-202ENST00000417670 633 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 BNIP3P42-201ENST00000454982 569 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.77□□□□□ -0.21
PTPN6P29350 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.77□□□□□ -0.21
PTPN6P29350 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PTPN6P29350 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 BNIP3P29-201ENST00000598302 571 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.77□□□□□ -0.21
PTPN6P29350 AC011447.5-201ENST00000616168 564 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 AC006453.4-201ENST00000636949 1252 ntBASIC13.77□□□□□ -0.21
PTPN6P29350 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PTPN6P29350 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTPN6P29350 AC020658.7-201ENST00000624274 2442 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 AC126335.2-201ENST00000623362 4637 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 AC009093.10-201ENST00000641956 1442 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms