Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.37□□□□□ -0.27
ABCD3P28288 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 AC078875.1-201ENST00000431907 724 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 EIF4HP1-201ENST00000453115 687 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCD3P28288 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.37□□□□□ -0.27
ABCD3P28288 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 AC009779.1-201ENST00000551138 283 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 AC104506.1-201ENST00000609247 429 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 AC244093.1-201ENST00000610837 814 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.37□□□□□ -0.27
ABCD3P28288 AC244452.3-201ENST00000636814 210 ntBASIC13.37□□□□□ -0.27
ABCD3P28288 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCD3P28288 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCD3P28288 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ABCD3P28288 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 AC018629.1-201ENST00000623381 1736 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 XBP1P1-201ENST00000436573 652 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.36□□□□□ -0.27
ABCD3P28288 PGAM1P5-201ENST00000548011 764 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.36□□□□□ -0.27
ABCD3P28288 MIR3615-201ENST00000581999 87 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 AC021016.3-201ENST00000608367 477 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ABCD3P28288 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.36□□□□□ -0.27
ABCD3P28288 AC138028.6-201ENST00000616106 1482 ntBASIC13.36□□□□□ -0.27
ABCD3P28288 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ABCD3P28288 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCD3P28288 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ABCD3P28288 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ABCD3P28288 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCD3P28288 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCD3P28288 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms