Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.33□□□□□ -0.12
CDH3P22223 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.33□□□□□ -0.12
CDH3P22223 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 POM121L10P-201ENST00000436994 1285 ntBASIC14.33□□□□□ -0.12
CDH3P22223 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH3P22223 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH3P22223 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH3P22223 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CDH3P22223 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 AL358472.3-201ENST00000608147 415 ntBASIC14.33□□□□□ -0.12
CDH3P22223 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 AL008638.5-201ENST00000623814 1298 ntBASIC14.33□□□□□ -0.12
CDH3P22223 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH3P22223 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH3P22223 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH3P22223 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH3P22223 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH3P22223 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH3P22223 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 AP001258.2-201ENST00000529891 490 ntBASIC14.32□□□□□ -0.12
CDH3P22223 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 AC007663.3-201ENST00000609632 465 ntBASIC14.32□□□□□ -0.12
CDH3P22223 AC244093.1-201ENST00000610837 814 ntBASIC14.32□□□□□ -0.12
CDH3P22223 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 AL359881.3-201ENST00000602640 1721 ntBASIC14.32□□□□□ -0.12
CDH3P22223 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CDH3P22223 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH3P22223 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH3P22223 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 MIR1247-201ENST00000408206 136 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms