Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN3P20807 AL442647.2-201ENST00000429864 857 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.03□□□□□ -0.16
CAPN3P20807 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN3P20807 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN3P20807 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CAPN3P20807 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.03□□□□□ -0.16
CAPN3P20807 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 AL583810.1-201ENST00000553344 1045 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 AC008735.3-201ENST00000596646 500 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
CAPN3P20807 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 AC138696.2-201ENST00000607376 223 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 AC005252.2-201ENST00000624630 1141 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 AC020910.5-201ENST00000623668 1865 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 AL591122.2-201ENST00000624125 1853 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 AC004241.5-201ENST00000623870 2448 ntBASIC14.03□□□□□ -0.16
CAPN3P20807 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CAPN3P20807 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CAPN3P20807 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.02□□□□□ -0.16
CAPN3P20807 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPN3P20807 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CAPN3P20807 AL356585.2-201ENST00000625078 2396 ntBASIC14.02□□□□□ -0.16
CAPN3P20807 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPN3P20807 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAPN3P20807 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.02□□□□□ -0.16
CAPN3P20807 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CAPN3P20807 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPN3P20807 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CAPN3P20807 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CAPN3P20807 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CAPN3P20807 SOCS2P1-201ENST00000417727 557 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 PFN1P12-201ENST00000455938 534 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.02□□□□□ -0.17
CAPN3P20807 AC104596.2-201ENST00000512793 793 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 RNA5SP412-201ENST00000516234 123 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPN3P20807 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPN3P20807 SNX29P1-201ENST00000548357 1007 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPN3P20807 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.02□□□□□ -0.17
CAPN3P20807 AP005019.2-201ENST00000615104 511 ntBASIC14.02□□□□□ -0.17
CAPN3P20807 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.02□□□□□ -0.17
CAPN3P20807 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CAPN3P20807 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CAPN3P20807 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAPN3P20807 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CAPN3P20807 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms