Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD58P19256 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD58P19256 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD58P19256 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD58P19256 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CD58P19256 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD58P19256 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD58P19256 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD58P19256 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.58■□□□□ 0.09
CD58P19256 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.58■□□□□ 0.09
CD58P19256 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 AC004899.1-201ENST00000424687 1714 ntBASIC15.58■□□□□ 0.08
CD58P19256 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.58■□□□□ 0.08
CD58P19256 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.58■□□□□ 0.08
CD58P19256 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.58■□□□□ 0.08
CD58P19256 TUBB8P8-201ENST00000458717 1058 ntBASIC15.58■□□□□ 0.08
CD58P19256 AC092658.1-201ENST00000505836 891 ntBASIC15.58■□□□□ 0.08
CD58P19256 AL160314.3-201ENST00000556041 767 ntBASIC15.58■□□□□ 0.08
CD58P19256 AC005586.2-201ENST00000563946 837 ntBASIC15.58■□□□□ 0.08
CD58P19256 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.58■□□□□ 0.08
CD58P19256 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.58■□□□□ 0.08
CD58P19256 CICP16-201ENST00000502609 2813 ntBASIC15.58■□□□□ 0.08
CD58P19256 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD58P19256 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.58■□□□□ 0.08
CD58P19256 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CD58P19256 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 AC144522.1-201ENST00000625111 1658 ntBASIC15.57■□□□□ 0.08
CD58P19256 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CD58P19256 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.57■□□□□ 0.08
CD58P19256 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.57■□□□□ 0.08
CD58P19256 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.57■□□□□ 0.08
CD58P19256 AC006122.1-201ENST00000493323 440 ntBASIC15.57■□□□□ 0.08
CD58P19256 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 SCARNA21-201ENST00000517026 139 ntBASIC15.57■□□□□ 0.08
CD58P19256 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.57■□□□□ 0.08
CD58P19256 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CD58P19256 AL023803.2-201ENST00000620080 638 ntBASIC15.57■□□□□ 0.08
CD58P19256 AL008638.5-201ENST00000623814 1298 ntBASIC15.57■□□□□ 0.08
CD58P19256 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 CYP4F23P-201ENST00000593402 1579 ntBASIC15.57■□□□□ 0.08
CD58P19256 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 CICP4-201ENST00000447359 2812 ntBASIC15.57■□□□□ 0.08
CD58P19256 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD58P19256 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CD58P19256 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.56■□□□□ 0.08
CD58P19256 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.56■□□□□ 0.08
CD58P19256 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD58P19256 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD58P19256 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD58P19256 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.56■□□□□ 0.08
CD58P19256 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD58P19256 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD58P19256 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD58P19256 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms