Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.9□□□□□ -0.02
ERCC2P18074 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 LAP3P2-201ENST00000454686 1454 ntBASIC14.9□□□□□ -0.02
ERCC2P18074 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ERCC2P18074 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ERCC2P18074 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 KRT18P36-201ENST00000411618 1276 ntBASIC14.9□□□□□ -0.02
ERCC2P18074 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.9□□□□□ -0.02
ERCC2P18074 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.9□□□□□ -0.02
ERCC2P18074 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ERCC2P18074 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ERCC2P18074 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.9□□□□□ -0.02
ERCC2P18074 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.9□□□□□ -0.02
ERCC2P18074 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERCC2P18074 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 AC090643.2-201ENST00000623442 2029 ntBASIC14.89□□□□□ -0.03
ERCC2P18074 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERCC2P18074 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERCC2P18074 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.89□□□□□ -0.03
ERCC2P18074 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERCC2P18074 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.89□□□□□ -0.03
ERCC2P18074 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERCC2P18074 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.89□□□□□ -0.03
ERCC2P18074 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.89□□□□□ -0.03
ERCC2P18074 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 PGAM1P5-201ENST00000548011 764 ntBASIC14.89□□□□□ -0.03
ERCC2P18074 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.89□□□□□ -0.03
ERCC2P18074 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.89□□□□□ -0.03
ERCC2P18074 RN7SL163P-201ENST00000583100 276 ntBASIC14.89□□□□□ -0.03
ERCC2P18074 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.89□□□□□ -0.03
ERCC2P18074 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.89□□□□□ -0.03
ERCC2P18074 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERCC2P18074 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ERCC2P18074 AC068587.8-201ENST00000641239 219 ntBASIC14.89□□□□□ -0.03
ERCC2P18074 AC004923.1-202ENST00000642106 209 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms