Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SMPD1P17405 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.9■□□□□ 0.14
SMPD1P17405 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.9■□□□□ 0.14
SMPD1P17405 RN7SL375P-201ENST00000492442 298 ntBASIC15.9■□□□□ 0.14
SMPD1P17405 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.9■□□□□ 0.14
SMPD1P17405 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMPD1P17405 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SMPD1P17405 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.9■□□□□ 0.14
SMPD1P17405 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.9■□□□□ 0.14
SMPD1P17405 MIR4265-201ENST00000582152 99 ntBASIC15.9■□□□□ 0.14
SMPD1P17405 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SMPD1P17405 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.9■□□□□ 0.14
SMPD1P17405 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.9■□□□□ 0.14
SMPD1P17405 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMPD1P17405 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMPD1P17405 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMPD1P17405 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.9■□□□□ 0.14
SMPD1P17405 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SMPD1P17405 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SMPD1P17405 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMPD1P17405 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMPD1P17405 OR52M2P-201ENST00000414298 959 ntBASIC15.89■□□□□ 0.13
SMPD1P17405 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 SLC25A15P3-201ENST00000505530 290 ntBASIC15.89■□□□□ 0.13
SMPD1P17405 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 RPL13AP3-202ENST00000494676 1473 ntBASIC15.89■□□□□ 0.13
SMPD1P17405 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.89■□□□□ 0.13
SMPD1P17405 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
SMPD1P17405 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 DBET-201ENST00000630918 3363 ntBASIC15.89■□□□□ 0.13
SMPD1P17405 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMPD1P17405 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMPD1P17405 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SMPD1P17405 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.88■□□□□ 0.13
SMPD1P17405 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.88■□□□□ 0.13
SMPD1P17405 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.88■□□□□ 0.13
SMPD1P17405 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 AL359091.4-201ENST00000610052 409 ntBASIC15.88■□□□□ 0.13
SMPD1P17405 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.88■□□□□ 0.13
SMPD1P17405 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMPD1P17405 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMPD1P17405 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.88■□□□□ 0.13
SMPD1P17405 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms