Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 RN7SL258P-201ENST00000478664 300 ntBASIC13.15□□□□□ -0.3
CCL3P10147 AC008723.1-201ENST00000506922 207 ntBASIC13.15□□□□□ -0.3
CCL3P10147 IGLV3-15-201ENST00000518356 244 ntBASIC13.15□□□□□ -0.3
CCL3P10147 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CCL3P10147 AC026803.1-201ENST00000569130 274 ntBASIC13.15□□□□□ -0.3
CCL3P10147 PHBP15-201ENST00000574228 665 ntBASIC13.15□□□□□ -0.3
CCL3P10147 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL3P10147 AC007718.1-201ENST00000621078 280 ntBASIC13.15□□□□□ -0.3
CCL3P10147 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL3P10147 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL3P10147 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL3P10147 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL3P10147 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3P10147 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
CCL3P10147 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 RPS9P1-201ENST00000419943 583 ntBASIC13.14□□□□□ -0.31
CCL3P10147 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 RPL8P2-201ENST00000430538 502 ntBASIC13.14□□□□□ -0.31
CCL3P10147 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL3P10147 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 RN7SL67P-201ENST00000492147 296 ntBASIC13.14□□□□□ -0.31
CCL3P10147 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.14□□□□□ -0.31
CCL3P10147 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 AC093752.3-201ENST00000567343 901 ntBASIC13.14□□□□□ -0.31
CCL3P10147 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL3P10147 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CCL3P10147 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 AC006453.1-201ENST00000636037 1257 ntBASIC13.14□□□□□ -0.31
CCL3P10147 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 CAP2P1-201ENST00000557743 1390 ntBASIC13.14□□□□□ -0.31
CCL3P10147 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CCL3P10147 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL3P10147 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL3P10147 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL3P10147 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL3P10147 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL3P10147 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL3P10147 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL3P10147 CCT8L1P-201ENST00000465400 1674 ntBASIC13.13□□□□□ -0.31
CCL3P10147 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL3P10147 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CCL3P10147 FAM90A2P-201ENST00000511144 1395 ntBASIC13.13□□□□□ -0.31
CCL3P10147 FAM90A25P-201ENST00000528404 1395 ntBASIC13.13□□□□□ -0.31
CCL3P10147 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms