Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.14■□□□□ 0.17
CYP3A4P08684 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CYP3A4P08684 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.14■□□□□ 0.17
CYP3A4P08684 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.14■□□□□ 0.17
CYP3A4P08684 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.14■□□□□ 0.17
CYP3A4P08684 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CYP3A4P08684 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CYP3A4P08684 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CYP3A4P08684 MARK2P16-201ENST00000605714 1723 ntBASIC16.14■□□□□ 0.17
CYP3A4P08684 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYP3A4P08684 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 CAP2P1-201ENST00000557743 1390 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CYP3A4P08684 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 AL583805.1-201ENST00000391389 531 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AC006987.1-201ENST00000413610 527 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 BX679664.3-201ENST00000414070 555 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 AC113935.1-201ENST00000471722 555 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AC005740.1-201ENST00000515639 522 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 RNA5SP423-201ENST00000517127 109 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.13■□□□□ 0.17
CYP3A4P08684 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 BAP1-211ENST00000615113 489 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
CYP3A4P08684 AC007718.1-201ENST00000621078 280 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AC015967.2-201ENST00000624092 234 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AC006435.4-201ENST00000625037 234 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 AL356737.1-201ENST00000634391 234 ntBASIC16.13■□□□□ 0.17
CYP3A4P08684 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.13■□□□□ 0.17
CYP3A4P08684 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.13■□□□□ 0.17
CYP3A4P08684 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CYP3A4P08684 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYP3A4P08684 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.12■□□□□ 0.17
CYP3A4P08684 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.12■□□□□ 0.17
CYP3A4P08684 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.12■□□□□ 0.17
CYP3A4P08684 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CYP3A4P08684 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CYP3A4P08684 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 MIR645-201ENST00000385283 94 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 AL627231.1-201ENST00000394467 1125 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 AL807761.2-201ENST00000422849 729 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 RPL8P2-201ENST00000430538 502 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.12■□□□□ 0.17
CYP3A4P08684 FTH1P22-201ENST00000456305 520 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.12■□□□□ 0.17
CYP3A4P08684 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.12■□□□□ 0.17
CYP3A4P08684 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.12■□□□□ 0.17
CYP3A4P08684 RN7SL455P-201ENST00000580629 282 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.12■□□□□ 0.17
CYP3A4P08684 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.12■□□□□ 0.17
CYP3A4P08684 AC068587.10-201ENST00000641210 219 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.12■□□□□ 0.17
CYP3A4P08684 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms