Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 HOMER2P2-201ENST00000451621 847 ntBASIC13.39□□□□□ -0.27
THBS1P07996 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.39□□□□□ -0.27
THBS1P07996 AC104989.1-201ENST00000519711 778 ntBASIC13.39□□□□□ -0.27
THBS1P07996 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.39□□□□□ -0.27
THBS1P07996 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.39□□□□□ -0.27
THBS1P07996 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.39□□□□□ -0.27
THBS1P07996 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
THBS1P07996 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.38□□□□□ -0.27
THBS1P07996 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
THBS1P07996 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS1P07996 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.38□□□□□ -0.27
THBS1P07996 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 HIST2H2BB-201ENST00000449108 381 ntBASIC13.38□□□□□ -0.27
THBS1P07996 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 DUX4L46-201ENST00000566845 751 ntBASIC13.38□□□□□ -0.27
THBS1P07996 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.38□□□□□ -0.27
THBS1P07996 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
THBS1P07996 AC023794.5-201ENST00000564380 2157 ntBASIC13.38□□□□□ -0.27
THBS1P07996 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
THBS1P07996 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
THBS1P07996 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.37□□□□□ -0.27
THBS1P07996 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms