Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.97□□□□□ -0.33
CNOT4O95628 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.97□□□□□ -0.33
CNOT4O95628 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 AC022748.3-201ENST00000621828 275 ntBASIC12.97□□□□□ -0.33
CNOT4O95628 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.97□□□□□ -0.33
CNOT4O95628 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CNOT4O95628 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
CNOT4O95628 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 FGD5P1-202ENST00000614866 2498 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CNOT4O95628 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.96□□□□□ -0.33
CNOT4O95628 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 AL157407.1-201ENST00000435784 904 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 EIF4HP1-201ENST00000453115 687 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CNOT4O95628 HIST2H2BC-201ENST00000498492 580 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.96□□□□□ -0.33
CNOT4O95628 AC005740.2-201ENST00000511085 419 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.96□□□□□ -0.33
CNOT4O95628 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.96□□□□□ -0.33
CNOT4O95628 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.96□□□□□ -0.33
CNOT4O95628 AC105129.2-201ENST00000559536 390 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.96□□□□□ -0.33
CNOT4O95628 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.96□□□□□ -0.33
CNOT4O95628 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.96□□□□□ -0.33
CNOT4O95628 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.96□□□□□ -0.33
CNOT4O95628 AC004923.1-202ENST00000642106 209 ntBASIC12.96□□□□□ -0.33
CNOT4O95628 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CNOT4O95628 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.96□□□□□ -0.33
CNOT4O95628 INTS4P1-203ENST00000641008 3683 ntBASIC12.96□□□□□ -0.34
CNOT4O95628 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CNOT4O95628 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CNOT4O95628 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
CNOT4O95628 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CNOT4O95628 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 AC244394.1-201ENST00000435000 1665 ntBASIC12.96□□□□□ -0.34
CNOT4O95628 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CNOT4O95628 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CNOT4O95628 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CNOT4O95628 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms