Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC19.7■□□□□ 0.74
NPHP4O75161 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.7■□□□□ 0.74
NPHP4O75161 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.7■□□□□ 0.74
NPHP4O75161 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NPHP4O75161 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NPHP4O75161 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.7■□□□□ 0.74
NPHP4O75161 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.7■□□□□ 0.74
NPHP4O75161 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NPHP4O75161 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPHP4O75161 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NPHP4O75161 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC19.69■□□□□ 0.74
NPHP4O75161 IGHVII-74-1-201ENST00000517572 241 ntBASIC19.69■□□□□ 0.74
NPHP4O75161 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NPHP4O75161 ABCD1P3-201ENST00000562927 605 ntBASIC19.69■□□□□ 0.74
NPHP4O75161 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC19.69■□□□□ 0.74
NPHP4O75161 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC19.69■□□□□ 0.74
NPHP4O75161 NAT9-204ENST00000578822 839 ntTSL 3 BASIC19.69■□□□□ 0.74
NPHP4O75161 BOLA3P2-201ENST00000586496 323 ntBASIC19.69■□□□□ 0.74
NPHP4O75161 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 AC022001.3-201ENST00000606330 596 ntBASIC19.69■□□□□ 0.74
NPHP4O75161 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.69■□□□□ 0.74
NPHP4O75161 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.69■□□□□ 0.74
NPHP4O75161 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.69■□□□□ 0.74
NPHP4O75161 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 KRT8P38-201ENST00000441370 1430 ntBASIC19.69■□□□□ 0.74
NPHP4O75161 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPHP4O75161 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NPHP4O75161 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 CETN3-205ENST00000522842 664 ntTSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 AC139100.2-201ENST00000616901 662 ntBASIC19.68■□□□□ 0.74
NPHP4O75161 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NPHP4O75161 HSD3BP1-201ENST00000286193 1111 ntBASIC19.68■□□□□ 0.74
NPHP4O75161 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 AC041040.1-201ENST00000425197 460 ntBASIC19.68■□□□□ 0.74
NPHP4O75161 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 PCTP-206ENST00000573500 919 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC19.68■□□□□ 0.74
NPHP4O75161 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.68■□□□□ 0.74
NPHP4O75161 AC148476.1-201ENST00000622182 705 ntBASIC19.68■□□□□ 0.74
NPHP4O75161 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPHP4O75161 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
NPHP4O75161 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.67■□□□□ 0.74
NPHP4O75161 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPHP4O75161 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NPHP4O75161 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms