Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 AC079178.1-201ENST00000420915 656 ntBASIC13.65□□□□□ -0.22
HCN1O60741 MTX1P1-201ENST00000440904 838 ntBASIC13.65□□□□□ -0.22
HCN1O60741 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.65□□□□□ -0.22
HCN1O60741 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 FTLP10-202ENST00000505798 471 ntBASIC13.65□□□□□ -0.22
HCN1O60741 COX5BP1-201ENST00000507622 393 ntBASIC13.65□□□□□ -0.22
HCN1O60741 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.65□□□□□ -0.22
HCN1O60741 MIR4741-201ENST00000579822 90 ntBASIC13.65□□□□□ -0.22
HCN1O60741 RN7SL713P-201ENST00000582127 302 ntBASIC13.65□□□□□ -0.22
HCN1O60741 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 ZACNP1-201ENST00000612259 710 ntBASIC13.65□□□□□ -0.22
HCN1O60741 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.65□□□□□ -0.22
HCN1O60741 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HCN1O60741 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.65□□□□□ -0.22
HCN1O60741 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
HCN1O60741 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HCN1O60741 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HCN1O60741 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.64□□□□□ -0.23
HCN1O60741 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.64□□□□□ -0.23
HCN1O60741 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HCN1O60741 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HCN1O60741 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.64□□□□□ -0.23
HCN1O60741 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.64□□□□□ -0.23
HCN1O60741 MESTP3-201ENST00000503460 968 ntBASIC13.64□□□□□ -0.23
HCN1O60741 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.64□□□□□ -0.23
HCN1O60741 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.64□□□□□ -0.23
HCN1O60741 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms