Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 COX5BP1-201ENST00000507622 393 ntBASIC11.66□□□□□ -0.54
UPK2O00526 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.66□□□□□ -0.54
UPK2O00526 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.66□□□□□ -0.54
UPK2O00526 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.66□□□□□ -0.54
UPK2O00526 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.66□□□□□ -0.54
UPK2O00526 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.66□□□□□ -0.54
UPK2O00526 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.66□□□□□ -0.54
UPK2O00526 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
UPK2O00526 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UPK2O00526 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 FTH1P14-201ENST00000482930 551 ntBASIC11.65□□□□□ -0.54
UPK2O00526 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 USP32P1-208ENST00000506594 1164 ntBASIC11.65□□□□□ -0.54
UPK2O00526 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.65□□□□□ -0.54
UPK2O00526 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.65□□□□□ -0.54
UPK2O00526 AC027307.3-201ENST00000594262 1100 ntBASIC11.65□□□□□ -0.54
UPK2O00526 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 AC233724.13-201ENST00000598383 410 ntBASIC11.65□□□□□ -0.54
UPK2O00526 AC073413.1-201ENST00000603927 732 ntBASIC11.65□□□□□ -0.54
UPK2O00526 AL358472.3-201ENST00000608147 415 ntBASIC11.65□□□□□ -0.54
UPK2O00526 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
UPK2O00526 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
UPK2O00526 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
UPK2O00526 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UPK2O00526 AC073548.1-201ENST00000624088 1882 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms