Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AC026271.1-201ENST00000447794 1348 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 CLK2P1-201ENST00000416636 1294 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 FTLP3-201ENST00000427242 528 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 RN7SL76P-201ENST00000482435 289 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 RN7SL638P-201ENST00000494527 290 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AC136621.1-201ENST00000624017 2304 ntBASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RGPD3A6NKT7 AC015813.5-201ENST00000624641 1514 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC022532.1-201ENST00000624563 1728 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC002350.2-201ENST00000623894 1828 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 HNRNPA1P59-201ENST00000430583 918 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC009517.1-201ENST00000454750 570 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 SNORA47-201ENST00000458862 138 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 RN7SL22P-201ENST00000471800 269 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC112694.1-202ENST00000540985 943 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 AC099795.2-201ENST00000639582 440 ntBASIC17.49■□□□□ 0.39
RGPD3A6NKT7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RGPD3A6NKT7 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 SNORA50D-201ENST00000408059 134 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AL158032.2-201ENST00000616818 195 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 MIR6819-201ENST00000622122 61 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms