Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 FAM58BP-201ENST00000439056 645 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 NUP210P1-202ENST00000504322 710 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 AC024681.1-201ENST00000521917 487 ntBASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA1Q9UND3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC005089.1-201ENST00000619486 2241 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 HINT2P1-201ENST00000419438 481 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 PUDPP3-201ENST00000445368 636 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC125604.1-201ENST00000496255 707 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 MARK2P5-201ENST00000507649 634 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC139749.1-202ENST00000617529 3139 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 SALL4P5-201ENST00000419001 1760 ntBASIC13.43□□□□□ -0.26
NPIPA1Q9UND3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms