Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 SIGLEC22P-201ENST00000599104 714 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC005632.3-201ENST00000605544 308 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC015967.2-201ENST00000624092 234 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AC006435.4-201ENST00000625037 234 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 AL356737.1-201ENST00000634391 234 ntBASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPC1L1Q9UHC9 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC19.14■□□□□ 0.66
NPC1L1Q9UHC9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 SALL4P6-201ENST00000429385 1691 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AL928654.5-201ENST00000624831 2501 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 CR392039.2-201ENST00000623182 509 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AGAP10P-201ENST00000454844 2418 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 AC093462.1-201ENST00000621167 1683 ntBASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NPC1L1Q9UHC9 FMO6P-201ENST00000236166 1620 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 BEND3P1-201ENST00000421591 1944 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SNORA50C-201ENST00000408535 133 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AC018638.5-201ENST00000450885 754 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 RN7SL81P-201ENST00000493781 261 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms