Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 KRT17P5-201ENST00000332088 839 ntBASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AL627231.1-201ENST00000394467 1125 ntBASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 RN7SL665P-201ENST00000578793 300 ntBASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 AC005041.3-201ENST00000606287 649 ntBASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KIAA1549Q9HCM3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.77□□□□□ -0.36
KIAA1549Q9HCM3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 AC253536.4-201ENST00000440539 267 ntBASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 AC008267.1-201ENST00000474858 1069 ntBASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 AC107464.3-201ENST00000609172 737 ntBASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KIAA1549Q9HCM3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AC104784.1-201ENST00000473096 294 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 SIGLEC18P-201ENST00000602271 909 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 LINC01815-202ENST00000641468 1409 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MARK2P16-201ENST00000605714 1723 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms