Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VGLL1Q99990 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.1□□□□□ -0.63
VGLL1Q99990 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.1□□□□□ -0.63
VGLL1Q99990 FAM90A12P-201ENST00000519497 2375 ntBASIC11.1□□□□□ -0.63
VGLL1Q99990 FAM90A24P-201ENST00000520792 2369 ntBASIC11.1□□□□□ -0.63
VGLL1Q99990 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VGLL1Q99990 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VGLL1Q99990 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
VGLL1Q99990 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VGLL1Q99990 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
VGLL1Q99990 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AL138725.1-201ENST00000407347 1314 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.09□□□□□ -0.63
VGLL1Q99990 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.63
VGLL1Q99990 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SLC7A15P-201ENST00000424028 1363 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AL442647.2-201ENST00000429864 857 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.09□□□□□ -0.63
VGLL1Q99990 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC055876.2-201ENST00000531834 546 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.09□□□□□ -0.63
VGLL1Q99990 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.09□□□□□ -0.63
VGLL1Q99990 AP005019.2-201ENST00000615104 511 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 AC090643.2-201ENST00000623442 2029 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VGLL1Q99990 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.09□□□□□ -0.63
VGLL1Q99990 KRT8P35-201ENST00000483942 1338 ntBASIC11.09□□□□□ -0.63
VGLL1Q99990 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
VGLL1Q99990 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
VGLL1Q99990 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
VGLL1Q99990 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
VGLL1Q99990 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
VGLL1Q99990 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
VGLL1Q99990 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.08□□□□□ -0.64
VGLL1Q99990 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VGLL1Q99990 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.08□□□□□ -0.64
VGLL1Q99990 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VGLL1Q99990 MEX3B-202ENST00000558133 4333 ntBASIC11.08□□□□□ -0.64
VGLL1Q99990 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms