Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 KRT8P14-201ENST00000414254 1442 ntBASIC12.96□□□□□ -0.34
VRK1Q99986 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VRK1Q99986 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 PPT1-213ENST00000641319 2388 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VRK1Q99986 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 MST1P2-201ENST00000457982 2291 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.95□□□□□ -0.34
VRK1Q99986 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.95□□□□□ -0.34
VRK1Q99986 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.95□□□□□ -0.34
VRK1Q99986 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 AC022494.1-201ENST00000466044 728 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.95□□□□□ -0.34
VRK1Q99986 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.95□□□□□ -0.34
VRK1Q99986 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.95□□□□□ -0.34
VRK1Q99986 DUX4L45-201ENST00000566406 1057 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.95□□□□□ -0.34
VRK1Q99986 RN7SL48P-201ENST00000579283 293 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 ENPP7P14-201ENST00000621765 1040 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 AL645728.2-202ENST00000641679 227 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 PRSS30P-206ENST00000641773 873 ntBASIC12.95□□□□□ -0.34
VRK1Q99986 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
VRK1Q99986 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.95□□□□□ -0.34
VRK1Q99986 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VRK1Q99986 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.94□□□□□ -0.34
VRK1Q99986 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
VRK1Q99986 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.94□□□□□ -0.34
VRK1Q99986 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.94□□□□□ -0.34
VRK1Q99986 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.94□□□□□ -0.34
VRK1Q99986 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.94□□□□□ -0.34
VRK1Q99986 GPR182-203ENST00000622922 591 ntBASIC12.94□□□□□ -0.34
VRK1Q99986 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.94□□□□□ -0.34
VRK1Q99986 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms