Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.34□□□□□ -0.59
TRGV9Q99603 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.34□□□□□ -0.59
TRGV9Q99603 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.34□□□□□ -0.59
TRGV9Q99603 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.34□□□□□ -0.59
TRGV9Q99603 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC140912.1-201ENST00000577171 1054 ntBASIC11.34□□□□□ -0.59
TRGV9Q99603 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.34□□□□□ -0.59
TRGV9Q99603 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC008825.2-201ENST00000603374 718 ntBASIC11.34□□□□□ -0.59
TRGV9Q99603 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC002472.3-201ENST00000640124 621 ntBASIC11.34□□□□□ -0.59
TRGV9Q99603 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.34□□□□□ -0.59
TRGV9Q99603 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.34□□□□□ -0.59
TRGV9Q99603 AL591122.2-201ENST00000624125 1853 ntBASIC11.34□□□□□ -0.59
TRGV9Q99603 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TRGV9Q99603 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 MSTO2P-201ENST00000314835 1709 ntBASIC11.33□□□□□ -0.6
TRGV9Q99603 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.33□□□□□ -0.6
TRGV9Q99603 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 TSPY16P-201ENST00000449843 468 ntBASIC11.33□□□□□ -0.6
TRGV9Q99603 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.33□□□□□ -0.6
TRGV9Q99603 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TRGV9Q99603 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV9Q99603 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV9Q99603 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms