Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 KRT18P66-201ENST00000452970 1269 ntBASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK5RAP2Q96SN8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 ALG1L7P-201ENST00000502317 768 ntBASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 AC011471.3-201ENST00000623576 402 ntBASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 HLA-C-210ENST00000640219 976 ntBASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 FUCA1P1-201ENST00000374476 1351 ntBASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 PRSS3P1-201ENST00000503996 742 ntBASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK5RAP2Q96SN8 MST1P2-201ENST00000457982 2291 ntBASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AC093826.1-201ENST00000508655 993 ntBASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 ALG1L6P-201ENST00000515248 758 ntBASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AC132825.4-202ENST00000578792 434 ntBASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 AC006158.1-201ENST00000610661 249 ntBASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP2Q96SN8 CTBP2P8-201ENST00000422584 1330 ntBASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 GGTLC4P-201ENST00000402176 664 ntBASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 PSMD4P1-201ENST00000433951 1109 ntBASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 AL139008.1-201ENST00000437894 228 ntBASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDK5RAP2Q96SN8 RN7SL23P-201ENST00000484055 275 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms