Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.77□□□□□ -0.2
TM9SF4Q92544 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.77□□□□□ -0.2
TM9SF4Q92544 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.77□□□□□ -0.2
TM9SF4Q92544 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF4Q92544 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 MBLAC2-202ENST00000514906 1936 ntBASIC13.77□□□□□ -0.21
TM9SF4Q92544 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AL161670.2-201ENST00000557650 1227 ntBASIC13.77□□□□□ -0.21
TM9SF4Q92544 AC012508.2-201ENST00000567613 1472 ntBASIC13.77□□□□□ -0.21
TM9SF4Q92544 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF4Q92544 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF4Q92544 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RN7SKP175-201ENST00000408472 289 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 RNMTL1P1-201ENST00000454103 560 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 TMEM198B-204ENST00000484016 896 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC026434.2-201ENST00000506094 1078 ntBASIC13.76□□□□□ -0.21
TM9SF4Q92544 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF4Q92544 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms