Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC3Q92529 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.41■□□□□ 0.06
SHC3Q92529 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SHC3Q92529 BTBD6P1-201ENST00000412176 1267 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 XBP1P1-201ENST00000436573 652 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 RNMTL1P1-201ENST00000454103 560 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 KRT18P15-201ENST00000458108 1291 ntBASIC15.41■□□□□ 0.06
SHC3Q92529 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.41■□□□□ 0.06
SHC3Q92529 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.41■□□□□ 0.06
SHC3Q92529 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.41■□□□□ 0.06
SHC3Q92529 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.41■□□□□ 0.06
SHC3Q92529 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.41■□□□□ 0.06
SHC3Q92529 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
SHC3Q92529 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHC3Q92529 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 AC018629.1-201ENST00000623381 1736 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SHC3Q92529 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.4■□□□□ 0.06
SHC3Q92529 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SHC3Q92529 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.4■□□□□ 0.06
SHC3Q92529 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 AL591846.1-201ENST00000451736 433 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AC021723.1-201ENST00000486306 515 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.4■□□□□ 0.06
SHC3Q92529 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.4■□□□□ 0.06
SHC3Q92529 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AC008805.1-201ENST00000590892 364 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.4■□□□□ 0.06
SHC3Q92529 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AC005695.3-201ENST00000614522 232 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AC004899.1-201ENST00000424687 1714 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.4■□□□□ 0.06
SHC3Q92529 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SHC3Q92529 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHC3Q92529 AC007952.5-201ENST00000572818 1486 ntBASIC15.4■□□□□ 0.06
SHC3Q92529 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHC3Q92529 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHC3Q92529 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms