Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 INTS4P1-203ENST00000641008 3683 ntBASIC21.98■■□□□ 1.11
CCNB3Q8WWL7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNB3Q8WWL7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNB3Q8WWL7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNB3Q8WWL7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 AL157792.1-201ENST00000488281 530 ntBASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CCNB3Q8WWL7 AC023908.3-201ENST00000564211 3047 ntBASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 HSPA8P5-201ENST00000456928 2069 ntBASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 AC007686.3-201ENST00000619017 3487 ntBASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 CSNK1G2P1-201ENST00000442675 955 ntBASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNB3Q8WWL7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.11
CCNB3Q8WWL7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AC084752.1-201ENST00000509766 622 ntBASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AC002044.2-201ENST00000624910 970 ntBASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 LINC00431-202ENST00000636375 159 ntBASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 AL022313.4-201ENST00000562756 2046 ntBASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNB3Q8WWL7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNB3Q8WWL7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms