Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC079781.5-202ENST00000641784 3743 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 TCAM1P-207ENST00000485295 1537 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SNORA40.4-201ENST00000390971 128 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 CD8B2-202ENST00000417670 633 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 PUDPP3-201ENST00000445368 636 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 FAM86HP-204ENST00000513466 959 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC023310.1-201ENST00000554836 735 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AC020910.6-201ENST00000623084 1459 ntBASIC14.88□□□□□ -0.03
PTCD2Q8WV60 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCD2Q8WV60 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC020910.5-201ENST00000623668 1865 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 MIR326-201ENST00000362220 95 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 GOLGA2P4-201ENST00000441462 777 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 CNN2P10-201ENST00000443067 918 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC106820.3-201ENST00000561653 397 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC073413.1-201ENST00000603927 732 ntBASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms