Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHKBP1Q8TBC3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AHCYP4-201ENST00000419201 1315 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 RPL17P11-201ENST00000417593 544 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AC098935.1-201ENST00000446057 611 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AC103810.10-201ENST00000606504 343 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AC139712.1-201ENST00000378256 1875 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SHKBP1Q8TBC3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AL137784.3-201ENST00000623858 2288 ntBASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 RNA5SP359-201ENST00000364838 113 ntBASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AC138894.2-201ENST00000602838 371 ntBASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AP003419.4-201ENST00000616071 517 ntBASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHKBP1Q8TBC3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms