Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 KRT18P15-201ENST00000458108 1291 ntBASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 RN7SL752P-201ENST00000463779 287 ntBASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 PPY2P-201ENST00000582808 702 ntBASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 AL022328.1-201ENST00000610050 478 ntBASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 E2F3P2-201ENST00000447755 1422 ntBASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKAL1Q5VV42 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 MIR4783-201ENST00000580343 82 ntBASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CDKAL1Q5VV42 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AC009474.1-201ENST00000455096 1565 ntBASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKAL1Q5VV42 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms