Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 HLA-V-201ENST00000429037 534 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AL645933.1-201ENST00000440087 609 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 CSF2RBP1-201ENST00000447905 391 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 SNX29P1-201ENST00000548357 1007 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 RBM8B-201ENST00000555532 525 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 DUX4L45-201ENST00000566406 1057 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 AC244394.1-201ENST00000435000 1665 ntBASIC17.35■□□□□ 0.37
RNF20Q5VTR2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
RNF20Q5VTR2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.34■□□□□ 0.37
RNF20Q5VTR2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.34■□□□□ 0.37
RNF20Q5VTR2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 EEF1DP1-201ENST00000585891 896 ntBASIC17.34■□□□□ 0.37
RNF20Q5VTR2 AC009884.2-201ENST00000603110 324 ntBASIC17.34■□□□□ 0.37
RNF20Q5VTR2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF20Q5VTR2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 AC005252.3-201ENST00000623855 2258 ntBASIC17.33■□□□□ 0.37
RNF20Q5VTR2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF20Q5VTR2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AL008718.2-201ENST00000609206 1313 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 USP17L6P-201ENST00000382470 1197 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AC100827.2-201ENST00000563214 1194 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AC133552.6-201ENST00000613406 534 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF20Q5VTR2 AC005840.4-201ENST00000541242 2494 ntBASIC17.33■□□□□ 0.36
RNF20Q5VTR2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms