Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
FAM78BQ5VT40 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
FAM78BQ5VT40 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.63□□□□□ -0.55
FAM78BQ5VT40 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC097493.3-201ENST00000509725 367 ntBASIC11.62□□□□□ -0.55
FAM78BQ5VT40 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC010336.2-201ENST00000564226 506 ntBASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AC215219.1-201ENST00000400706 1817 ntBASIC11.62□□□□□ -0.55
FAM78BQ5VT40 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.62□□□□□ -0.55
FAM78BQ5VT40 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AC087499.5-201ENST00000452760 1342 ntBASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AC092580.3-201ENST00000430932 139 ntBASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
FAM78BQ5VT40 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms